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        <a href="tfaces-module.html">Package&nbsp;tfaces</a> ::
        <a href="tfaces.collection-module.html">Package&nbsp;collection</a> ::
        Module&nbsp;DroneExperiment
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<h1 class="epydoc">Source Code for <a href="tfaces.collection.DroneExperiment-module.html">Module tfaces.collection.DroneExperiment</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno"> 1</tt>  <tt class="py-line"><tt class="py-docstring">'''</tt> </tt>
<a name="L2"></a><tt class="py-lineno"> 2</tt>  <tt class="py-line"><tt class="py-docstring">Created on Jul 4, 2009</tt> </tt>
<a name="L3"></a><tt class="py-lineno"> 3</tt>  <tt class="py-line"><tt class="py-docstring">@author: mjbommar</tt> </tt>
<a name="L4"></a><tt class="py-lineno"> 4</tt>  <tt class="py-line"><tt class="py-docstring">'''</tt> </tt>
<a name="L5"></a><tt class="py-lineno"> 5</tt>  <tt class="py-line"> </tt>
<a name="L6"></a><tt class="py-lineno"> 6</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-0" class="py-name" targets="Package tfaces=tfaces-module.html"><a title="tfaces" class="py-name" href="#" onclick="return doclink('link-0', 'tfaces', 'link-0');">tfaces</a></tt><tt class="py-op">.</tt><tt id="link-1" class="py-name" targets="Package tfaces.collection=tfaces.collection-module.html"><a title="tfaces.collection" class="py-name" href="#" onclick="return doclink('link-1', 'collection', 'link-1');">collection</a></tt><tt class="py-op">.</tt><tt id="link-2" class="py-name" targets="Module tfaces.collection.Experiment=tfaces.collection.Experiment-module.html,Class tfaces.collection.Experiment.Experiment=tfaces.collection.Experiment.Experiment-class.html"><a title="tfaces.collection.Experiment
tfaces.collection.Experiment.Experiment" class="py-name" href="#" onclick="return doclink('link-2', 'Experiment', 'link-2');">Experiment</a></tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L7"></a><tt class="py-lineno"> 7</tt>  <tt class="py-line"> </tt>
<a name="L8"></a><tt class="py-lineno"> 8</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">os</tt><tt class="py-op">,</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">,</tt> <tt class="py-name">sys</tt><tt class="py-op">,</tt> <tt class="py-name">glob</tt><tt class="py-op">,</tt> <tt class="py-name">re</tt> </tt>
<a name="L9"></a><tt class="py-lineno"> 9</tt>  <tt class="py-line"> </tt>
<a name="DroneExperiment"></a><div id="DroneExperiment-def"><a name="L10"></a><tt class="py-lineno">10</tt> <a class="py-toggle" href="#" id="DroneExperiment-toggle" onclick="return toggle('DroneExperiment');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="tfaces.collection.DroneExperiment.DroneExperiment-class.html">DroneExperiment</a><tt class="py-op">(</tt><tt class="py-base-class">Experiment</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="DroneExperiment-collapsed" style="display:none;" pad="++" indent="++++"></div><div id="DroneExperiment-expanded"><a name="L11"></a><tt class="py-lineno">11</tt>  <tt class="py-line">    <tt class="py-docstring">'''</tt> </tt>
<a name="L12"></a><tt class="py-lineno">12</tt>  <tt class="py-line"><tt class="py-docstring">    The Drone Experiment class loads an Experiment from a </tt> </tt>
<a name="L13"></a><tt class="py-lineno">13</tt>  <tt class="py-line"><tt class="py-docstring">    Drone or GridSweeper Drone experiment.</tt> </tt>
<a name="L14"></a><tt class="py-lineno">14</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L15"></a><tt class="py-lineno">15</tt>  <tt class="py-line"><tt class="py-docstring">    Drone: http://www.cscs.umich.edu/Software/Drone/</tt> </tt>
<a name="L16"></a><tt class="py-lineno">16</tt>  <tt class="py-line"><tt class="py-docstring">    GridSweeper: http://cscs.umich.edu/PmWiki/pmwiki.php/CSCSSoftware/GridSweeper</tt> </tt>
<a name="L17"></a><tt class="py-lineno">17</tt>  <tt class="py-line"><tt class="py-docstring">    '''</tt> </tt>
<a name="L18"></a><tt class="py-lineno">18</tt>  <tt class="py-line">     </tt>
<a name="DroneExperiment.__init__"></a><div id="DroneExperiment.__init__-def"><a name="L19"></a><tt class="py-lineno">19</tt> <a class="py-toggle" href="#" id="DroneExperiment.__init__-toggle" onclick="return toggle('DroneExperiment.__init__');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="tfaces.collection.DroneExperiment.DroneExperiment-class.html#__init__">__init__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">experimentDirectory</tt> <tt class="py-op">=</tt> <tt class="py-string">'.'</tt><tt class="py-op">,</tt> <tt class="py-param">reportFileName</tt> <tt class="py-op">=</tt> <tt class="py-string">'report'</tt><tt class="py-op">,</tt> <tt class="py-param">parseHeader</tt> <tt class="py-op">=</tt> <tt class="py-name">True</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="DroneExperiment.__init__-collapsed" style="display:none;" pad="++" indent="++++++++"></div><div id="DroneExperiment.__init__-expanded"><a name="L20"></a><tt class="py-lineno">20</tt>  <tt class="py-line">        <tt class="py-docstring">'''</tt> </tt>
<a name="L21"></a><tt class="py-lineno">21</tt>  <tt class="py-line"><tt class="py-docstring">        The Drone Experiment constructor takes as arguments the directory in which the</tt> </tt>
<a name="L22"></a><tt class="py-lineno">22</tt>  <tt class="py-line"><tt class="py-docstring">        experiment was stored, and whether to parse the headers from the report file.</tt> </tt>
<a name="L23"></a><tt class="py-lineno">23</tt>  <tt class="py-line"><tt class="py-docstring">        '''</tt> </tt>
<a name="L24"></a><tt class="py-lineno">24</tt>  <tt class="py-line">         </tt>
<a name="L25"></a><tt class="py-lineno">25</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">reportFileRE</tt> <tt class="py-op">=</tt> <tt class="py-name">re</tt><tt class="py-op">.</tt><tt class="py-name">compile</tt><tt class="py-op">(</tt><tt class="py-string">'%s.[0-9]+'</tt> <tt class="py-op">%</tt> <tt class="py-name">reportFileName</tt><tt class="py-op">)</tt> </tt>
<a name="L26"></a><tt class="py-lineno">26</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">reportXMLFileRE</tt> <tt class="py-op">=</tt> <tt class="py-name">re</tt><tt class="py-op">.</tt><tt class="py-name">compile</tt><tt class="py-op">(</tt><tt class="py-string">'%s.xml.[0-9]+'</tt> <tt class="py-op">%</tt> <tt class="py-name">reportFileName</tt><tt class="py-op">)</tt> </tt>
<a name="L27"></a><tt class="py-lineno">27</tt>  <tt class="py-line">         </tt>
<a name="L28"></a><tt class="py-lineno">28</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">parseHeader</tt> <tt class="py-op">=</tt> <tt class="py-name">parseHeader</tt> </tt>
<a name="L29"></a><tt class="py-lineno">29</tt>  <tt class="py-line">         </tt>
<a name="L30"></a><tt class="py-lineno">30</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-3" class="py-name" targets="Method tfaces.collection.DroneExperiment.DroneExperiment.setExperimentDirectory()=tfaces.collection.DroneExperiment.DroneExperiment-class.html#setExperimentDirectory"><a title="tfaces.collection.DroneExperiment.DroneExperiment.setExperimentDirectory" class="py-name" href="#" onclick="return doclink('link-3', 'setExperimentDirectory', 'link-3');">setExperimentDirectory</a></tt><tt class="py-op">(</tt><tt class="py-name">experimentDirectory</tt><tt class="py-op">)</tt> </tt>
</div><a name="L31"></a><tt class="py-lineno">31</tt>  <tt class="py-line">     </tt>
<a name="DroneExperiment.setExperimentDirectory"></a><div id="DroneExperiment.setExperimentDirectory-def"><a name="L32"></a><tt class="py-lineno">32</tt> <a class="py-toggle" href="#" id="DroneExperiment.setExperimentDirectory-toggle" onclick="return toggle('DroneExperiment.setExperimentDirectory');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="tfaces.collection.DroneExperiment.DroneExperiment-class.html#setExperimentDirectory">setExperimentDirectory</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">path</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="DroneExperiment.setExperimentDirectory-collapsed" style="display:none;" pad="++" indent="++++++++"></div><div id="DroneExperiment.setExperimentDirectory-expanded"><a name="L33"></a><tt class="py-lineno">33</tt>  <tt class="py-line">        <tt class="py-docstring">'''</tt> </tt>
<a name="L34"></a><tt class="py-lineno">34</tt>  <tt class="py-line"><tt class="py-docstring">        Set the Drone experiment directory.</tt> </tt>
<a name="L35"></a><tt class="py-lineno">35</tt>  <tt class="py-line"><tt class="py-docstring">        '''</tt> </tt>
<a name="L36"></a><tt class="py-lineno">36</tt>  <tt class="py-line">        <tt class="py-comment"># Convert to an absolute path and check that it exists</tt> </tt>
<a name="L37"></a><tt class="py-lineno">37</tt>  <tt class="py-line">        <tt class="py-name">path</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">abspath</tt><tt class="py-op">(</tt><tt class="py-name">path</tt><tt class="py-op">)</tt> </tt>
<a name="L38"></a><tt class="py-lineno">38</tt>  <tt class="py-line">         </tt>
<a name="L39"></a><tt class="py-lineno">39</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">path</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L40"></a><tt class="py-lineno">40</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">Exception</tt><tt class="py-op">(</tt><tt class="py-string">"DroneExperiment::setExperimentDirectory: path %s does not exist"</tt> <tt class="py-op">%</tt> <tt class="py-name">path</tt><tt class="py-op">)</tt> </tt>
<a name="L41"></a><tt class="py-lineno">41</tt>  <tt class="py-line">         </tt>
<a name="L42"></a><tt class="py-lineno">42</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">endswith</tt><tt class="py-op">(</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">sep</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L43"></a><tt class="py-lineno">43</tt>  <tt class="py-line">            <tt class="py-name">path</tt> <tt class="py-op">+=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">sep</tt> </tt>
<a name="L44"></a><tt class="py-lineno">44</tt>  <tt class="py-line">         </tt>
<a name="L45"></a><tt class="py-lineno">45</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">path</tt> <tt class="py-op">=</tt> <tt class="py-name">path</tt> </tt>
</div><a name="L46"></a><tt class="py-lineno">46</tt>  <tt class="py-line">     </tt>
<a name="DroneExperiment.findRuns"></a><div id="DroneExperiment.findRuns-def"><a name="L47"></a><tt class="py-lineno">47</tt> <a class="py-toggle" href="#" id="DroneExperiment.findRuns-toggle" onclick="return toggle('DroneExperiment.findRuns');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="tfaces.collection.DroneExperiment.DroneExperiment-class.html#findRuns">findRuns</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">path</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="DroneExperiment.findRuns-collapsed" style="display:none;" pad="++" indent="++++++++"></div><div id="DroneExperiment.findRuns-expanded"><a name="L48"></a><tt class="py-lineno">48</tt>  <tt class="py-line">        <tt class="py-docstring">"""</tt> </tt>
<a name="L49"></a><tt class="py-lineno">49</tt>  <tt class="py-line"><tt class="py-docstring">        This method finds all run report files that match the specified form.</tt> </tt>
<a name="L50"></a><tt class="py-lineno">50</tt>  <tt class="py-line"><tt class="py-docstring">        """</tt> </tt>
<a name="L51"></a><tt class="py-lineno">51</tt>  <tt class="py-line">        <tt class="py-name">runFiles</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L52"></a><tt class="py-lineno">52</tt>  <tt class="py-line">        <tt class="py-name">pathFiles</tt> <tt class="py-op">=</tt> <tt class="py-name">glob</tt><tt class="py-op">.</tt><tt class="py-name">glob</tt><tt class="py-op">(</tt><tt class="py-name">path</tt> <tt class="py-op">+</tt> <tt class="py-string">'*'</tt><tt class="py-op">)</tt> </tt>
<a name="L53"></a><tt class="py-lineno">53</tt>  <tt class="py-line">         </tt>
<a name="L54"></a><tt class="py-lineno">54</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">pathFile</tt> <tt class="py-keyword">in</tt> <tt class="py-name">pathFiles</tt><tt class="py-op">:</tt> </tt>
<a name="L55"></a><tt class="py-lineno">55</tt>  <tt class="py-line">            <tt class="py-name">fileName</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">basename</tt><tt class="py-op">(</tt><tt class="py-name">pathFile</tt><tt class="py-op">)</tt> </tt>
<a name="L56"></a><tt class="py-lineno">56</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">reportFileRE</tt><tt class="py-op">.</tt><tt class="py-name">match</tt><tt class="py-op">(</tt><tt class="py-name">fileName</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">reportXMLFileRE</tt><tt class="py-op">.</tt><tt class="py-name">match</tt><tt class="py-op">(</tt><tt class="py-name">fileName</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L57"></a><tt class="py-lineno">57</tt>  <tt class="py-line">                <tt class="py-name">runFiles</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">pathFile</tt><tt class="py-op">)</tt> </tt>
<a name="L58"></a><tt class="py-lineno">58</tt>  <tt class="py-line"> </tt>
<a name="L59"></a><tt class="py-lineno">59</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">entry</tt> <tt class="py-keyword">in</tt> <tt class="py-name">glob</tt><tt class="py-op">.</tt><tt class="py-name">glob</tt><tt class="py-op">(</tt><tt class="py-name">path</tt> <tt class="py-op">+</tt> <tt class="py-string">'*'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L60"></a><tt class="py-lineno">60</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">isdir</tt><tt class="py-op">(</tt><tt class="py-name">entry</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L61"></a><tt class="py-lineno">61</tt>  <tt class="py-line">                <tt class="py-name">runFiles</tt><tt class="py-op">.</tt><tt class="py-name">extend</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-4" class="py-name" targets="Method tfaces.collection.DroneExperiment.DroneExperiment.findRuns()=tfaces.collection.DroneExperiment.DroneExperiment-class.html#findRuns"><a title="tfaces.collection.DroneExperiment.DroneExperiment.findRuns" class="py-name" href="#" onclick="return doclink('link-4', 'findRuns', 'link-4');">findRuns</a></tt><tt class="py-op">(</tt><tt class="py-name">entry</tt> <tt class="py-op">+</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">sep</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div></div><a name="L62"></a><tt class="py-lineno">62</tt>  <tt class="py-line">         </tt>
<a name="L63"></a><tt class="py-lineno">63</tt>  <tt class="py-line">         </tt>
<a name="L64"></a><tt class="py-lineno">64</tt>  <tt class="py-line"><tt class="py-keyword">if</tt> <tt class="py-name">__name__</tt> <tt class="py-op">==</tt> <tt class="py-string">"__main__"</tt><tt class="py-op">:</tt> </tt>
<a name="L65"></a><tt class="py-lineno">65</tt>  <tt class="py-line">    <tt class="py-name">d</tt> <tt class="py-op">=</tt> <tt id="link-5" class="py-name" targets="Module tfaces.collection.DroneExperiment=tfaces.collection.DroneExperiment-module.html,Class tfaces.collection.DroneExperiment.DroneExperiment=tfaces.collection.DroneExperiment.DroneExperiment-class.html"><a title="tfaces.collection.DroneExperiment
tfaces.collection.DroneExperiment.DroneExperiment" class="py-name" href="#" onclick="return doclink('link-5', 'DroneExperiment', 'link-5');">DroneExperiment</a></tt><tt class="py-op">(</tt><tt class="py-name">experimentDirectory</tt> <tt class="py-op">=</tt> <tt class="py-string">'/windows/Data/workspace/tfaces/data/rlr-2/'</tt><tt class="py-op">)</tt> </tt>
<a name="L66"></a><tt class="py-lineno">66</tt>  <tt class="py-line"> </tt><script type="text/javascript">
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